LOVD - Variant listings for BRCA1

Patient data (#0000157)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Sean V. Tavtigian

Variant data
Allele Unknown
Reported pathogenicity Unknown
Concluded pathogenicity Unknown
Exon 21
DNA change c.5327C>A
BIC DNA change 5446C>A
Protein change p.P1776H
Posterior P 0.0311
IARC Class 2 - Likely not pathogenic or of little clinical significance
Key Observational Reference Spearman et al. 2008
Prior P reference Tavtigian et al. 2008
Missense analysis Prior P 0.03
Splicing prior P 0.01
Other Prior P 0.00
Combined prior P 0.03
Segregation LR -
Pathology LR 0.183
Sum Family LR 5.68
Co-occurrence LR -
case-control LR -
Product of LRs 1.03944
Comments -
DB-ID BRCA1_00101

1 entry in BRCA1

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
DB-ID Descending
Ascending
?/? Unknown 21 c.5327C>A 5446C>A p.P1776H 0.0311 2 - Likely not pathogenic or of little clinical significance Spearman et al. 2008 Tavtigian et al. 2008 0.03 0.01 0.00 0.03 - 0.183 5.68 - - 1.03944 - BRCA1_00101