LOVD - Variant listings for BRCA1

Patient data (#0000297)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Sean V. Tavtigian

Variant data
Allele Unknown
Reported pathogenicity Unknown
Concluded pathogenicity Unknown
Exon 21
DNA change c.5278-14C>G
BIC DNA change IVS20-14C>G
Protein change -
Posterior P 0.009
IARC Class 2 - Likely not pathogenic or of little clinical significance
Key Observational Reference Whiley et al., 2011
Prior P reference Vallee et al. 2016
Missense analysis Prior P -
Splicing prior P 0.04
Other Prior P 0.00
Combined prior P 0.04
Segregation LR -
Pathology LR -
Sum Family LR 0.14
Co-occurrence LR 1.58
case-control LR -
Product of LRs 0.22
Comments -
DB-ID BRCA1_00128

1 entry in BRCA1

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
DB-ID Descending
Ascending
?/? Unknown 21 c.5278-14C>G IVS20-14C>G - 0.009 2 - Likely not pathogenic or of little clinical significance Whiley et al., 2011 Vallee et al. 2016 - 0.04 0.00 0.04 - - 0.14 1.58 - 0.22 - BRCA1_00128