LOVD - Variant listings for BRCA1

Patient data (#0000353)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Sean V. Tavtigian

Variant data
Allele Unknown
Reported pathogenicity Unknown
Concluded pathogenicity Unknown
Exon 14
DNA change c.4479_4484+2dup
BIC DNA change 4598_4603+2dup
Protein change -
Posterior P 0.988
IARC Class 4 - Likely pathogenic
Key Observational Reference Whiley et al., 2011
Prior P reference Vallee et al. 2016
Missense analysis Prior P -
Splicing prior P 0.97
Other Prior P 0.00
Combined prior P 0.97
Segregation LR 0.95
Pathology LR 2.58
Sum Family LR -
Co-occurrence LR -
case-control LR -
Product of LRs 2.45
Comments -
DB-ID BRCA1_00126

1 entry in BRCA1

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
DB-ID Descending
Ascending
?/? Unknown 14 c.4479_4484+2dup 4598_4603+2dup - 0.988 4 - Likely pathogenic Whiley et al., 2011 Vallee et al. 2016 - 0.97 0.00 0.97 0.95 2.58 - - - 2.45 - BRCA1_00126