LOVD - Variant listings for BRCA1

Patient data (#0001247)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Tiana Francy

Variant data
Allele Unknown
Reported pathogenicity -
Concluded pathogenicity No known pathogenicity
Exon 17
DNA change c.5074+6C>G
BIC DNA change IVS17+6C>G
Protein change -
Posterior P 5.98132E-08
IARC Class 1 - Not pathogenic or of no clinical significance
Key Observational Reference Parsons et al 2019
Prior P reference -
Missense analysis Prior P -
Splicing prior P 0.04
Other Prior P 0.02
Combined prior P 0.04
Segregation LR 0.004977646
Pathology LR 0.000244592
Sum Family LR 0.700353645
Co-occurrence LR 1.68354305
case-control LR -
Product of LRs 0.00000143552
Comments -
DB-ID BRCA1_00715

1 entry in BRCA1

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
DB-ID Descending
Ascending
- Unknown 17 c.5074+6C>G IVS17+6C>G - 5.98132E-08 1 - Not pathogenic or of no clinical significance Parsons et al 2019 - - 0.04 0.02 0.04 0.004977646 0.000244592 0.700353645 1.68354305 - 0.00000143552 - BRCA1_00715