LOVD - Variant listings for BRCA1

Patient data (#0000811)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Tiana Francy

Variant data
Allele Unknown
Reported pathogenicity -
Concluded pathogenicity Probably pathogenic
Exon 2
DNA change c.1A>G
BIC DNA change 120A>G
Protein change p.M1V
Posterior P 0.985491446
IARC Class 4 - Likely Pathogenic
Key Observational Reference Parsons et al 2019
Prior P reference -
Missense analysis Prior P -
Splicing prior P -
Other Prior P 0.02
Combined prior P 0.96
Segregation LR 1.27139304
Pathology LR 2.226064
Sum Family LR -
Co-occurrence LR -
case-control LR -
Product of LRs 2.830202277
Comments -
DB-ID BRCA1_00279

1 entry in BRCA1

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
DB-ID Descending
Ascending
- Unknown 2 c.1A>G 120A>G p.M1V 0.985491446 4 - Likely Pathogenic Parsons et al 2019 - - - 0.02 0.96 1.27139304 2.226064 - - - 2.830202277 - BRCA1_00279