LOVD - Variant listings for BRCA2

Patient data (#0000275)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Sean V. Tavtigian

Variant data
Allele Unknown
Reported pathogenicity No known pathogenicity
Concluded pathogenicity Unknown
Exon 11
DNA change c.2786T>C
BIC DNA change 3014T>C
Protein change p.L929S
Posterior P 0.00007
IARC Class 1 - Not pathogenic or of no clinical significance
Key Observational Reference Spearman AD et al., J Clin Oncol, 26:5393-5400, 2008.
Prior P reference Tavtigian et al., Human Mutation 29: 1342-1354, 2008.
Missense analysis Prior P 0.02
Splicing prior P 0.01
Other Prior P 0.00
Combined prior P 0.02
Segregation LR -
Pathology LR 0.73
Sum Family LR 4.97
Co-occurrence LR 0.001
case-control LR -
Product of LRs 0.00363
Comments -

1 entry in BRCA2

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
-/? Unknown 11 c.2786T>C 3014T>C p.L929S 0.00007 1 - Not pathogenic or of no clinical significance Spearman AD et al., J Clin Oncol, 26:5393-5400, 2008. Tavtigian et al., Human Mutation 29: 1342-1354, 2008. 0.02 0.01 0.00 0.02 - 0.73 4.97 0.001 - 0.00363 -