LOVD - Variant listings for BRCA2

Patient data (#0000299)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Andrew Paquette

Variant data
Allele Unknown
Reported pathogenicity Unknown
Concluded pathogenicity Unknown
Exon 13
DNA change c.7007+1G>C
BIC DNA change IVS13+1G>C
Protein change -
Posterior P 0.988
IARC Class 4 - Likely pathogenic
Key Observational Reference Whiley et al., Human Mutation 32: 678-687, 2011
Prior P reference Vallee MP et al., Human Mutation 37: 627-639, 2016
Missense analysis Prior P -
Splicing prior P 0.97
Other Prior P 0.00
Combined prior P 0.97
Segregation LR 3.9
Pathology LR -
Sum Family LR 0.56
Co-occurrence LR 1.12
case-control LR -
Product of LRs 2.45
Comments -

1 entry in BRCA2

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
?/? Unknown 13 c.7007+1G>C IVS13+1G>C - 0.988 4 - Likely pathogenic Whiley et al., Human Mutation 32: 678-687, 2011 Vallee MP et al., Human Mutation 37: 627-639, 2016 - 0.97 0.00 0.97 3.9 - 0.56 1.12 - 2.45 -