LOVD - Variant listings for BRCA2

Patient data (#0000312)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Andrew Paquette

Variant data
Allele Unknown
Reported pathogenicity Unknown
Concluded pathogenicity Unknown
Exon 11
DNA change c.6322C>T
BIC DNA change 6550C>T
Protein change p.R2108C
Posterior P 0.001
IARC Class 2 - Likely not pathogenic or of little clinical significance
Key Observational Reference Whiley PJ et al., PLoS One. 2014 Jan 28, 9(1):e86836.
Prior P reference Tavtigian et al., Human Mutation 29: 1342-1354, 2008.
Missense analysis Prior P 0.02
Splicing prior P 0.02
Other Prior P 0.00
Combined prior P 0.02
Segregation LR 0.06
Pathology LR -
Sum Family LR -
Co-occurrence LR -
case-control LR -
Product of LRs 0.06
Comments -

1 entry in BRCA2

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
?/? Unknown 11 c.6322C>T 6550C>T p.R2108C 0.001 2 - Likely not pathogenic or of little clinical significance Whiley PJ et al., PLoS One. 2014 Jan 28, 9(1):e86836. Tavtigian et al., Human Mutation 29: 1342-1354, 2008. 0.02 0.02 0.00 0.02 0.06 - - - - 0.06 -