LOVD - Variant listings for BRCA2

Patient data (#0000317)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Andrew Paquette

Variant data
Allele Unknown
Reported pathogenicity Unknown
Concluded pathogenicity Unknown
Exon 25
DNA change c.9364G>A
BIC DNA change 9592G>A
Protein change p.A3122T
Posterior P 0.007
IARC Class 2 - Likely not pathogenic or of little clinical significance
Key Observational Reference Whiley PJ et al., PLoS One. 2014 Jan 28, 9(1):e86836.
Prior P reference Tavtigian et al., Human Mutation 29: 1342-1354, 2008.
Missense analysis Prior P 0.03
Splicing prior P 0.02
Other Prior P 0.00
Combined prior P 0.02
Segregation LR 0.34
Pathology LR -
Sum Family LR -
Co-occurrence LR -
case-control LR -
Product of LRs 0.34
Comments -

1 entry in BRCA2

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
?/? Unknown 25 c.9364G>A 9592G>A p.A3122T 0.007 2 - Likely not pathogenic or of little clinical significance Whiley PJ et al., PLoS One. 2014 Jan 28, 9(1):e86836. Tavtigian et al., Human Mutation 29: 1342-1354, 2008. 0.03 0.02 0.00 0.02 0.34 - - - - 0.34 -