LOVD - Variant listings for BRCA2

Patient data (#0000345)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Andrew Paquette

Variant data
Allele Unknown
Reported pathogenicity Unknown
Concluded pathogenicity Unknown
Exon 11
DNA change c.3156A>C
BIC DNA change 3384A>C
Protein change p.A1052A
Posterior P 0.001
IARC Class 1 - Not pathogenic or of no clinical significance
Key Observational Reference Thomassen M et al., Breast Cancer Res Treat. 2012 Apr, 132(3):1009-23.
Prior P reference Tavtigian et al., Human Mutation 29: 1342-1354, 2008.
Missense analysis Prior P 0.02
Splicing prior P 0.02
Other Prior P 0.00
Combined prior P 0.02
Segregation LR 0.025
Pathology LR -
Sum Family LR -
Co-occurrence LR 1.03
case-control LR -
Product of LRs 0.0256
Comments -

1 entry in BRCA2

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
?/? Unknown 11 c.3156A>C 3384A>C p.A1052A 0.001 1 - Not pathogenic or of no clinical significance Thomassen M et al., Breast Cancer Res Treat. 2012 Apr, 132(3):1009-23. Tavtigian et al., Human Mutation 29: 1342-1354, 2008. 0.02 0.02 0.00 0.02 0.025 - - 1.03 - 0.0256 -