LOVD - Variant listings for BRCA2

Patient data (#0000351)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Andrew Paquette

Variant data
Allele Unknown
Reported pathogenicity Unknown
Concluded pathogenicity Unknown
Exon 16
DNA change c.7618-1G>A
BIC DNA change IVS15-1G>A
Protein change -
Posterior P 1.000
IARC Class 5 - Definitely pathogenic
Key Observational Reference Easton DF et al., Am J Hum Genet, 81: 873-883, 2007.
Prior P reference Vallee MP et al., Human Mutation 37: 627-639, 2016
Missense analysis Prior P -
Splicing prior P 0.97
Other Prior P 0.00
Combined prior P 0.97
Segregation LR 1
Pathology LR -
Sum Family LR 32.36
Co-occurrence LR 2.88
case-control LR -
Product of LRs 93.20
Comments -

1 entry in BRCA2

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
?/? Unknown 16 c.7618-1G>A IVS15-1G>A - 1.000 5 - Definitely pathogenic Easton DF et al., Am J Hum Genet, 81: 873-883, 2007. Vallee MP et al., Human Mutation 37: 627-639, 2016 - 0.97 0.00 0.97 1 - 32.36 2.88 - 93.20 -