LOVD - Variant listings for BRCA2

Patient data (#0000363)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Andrew Paquette

Variant data
Allele Unknown
Reported pathogenicity Unknown
Concluded pathogenicity Unknown
Exon 11
DNA change c.2803G>A
BIC DNA change 3031G>A
Protein change p.D935N
Posterior P 0.00005
IARC Class 1 - Not pathogenic or of no clinical significance
Key Observational Reference Spurdle AB et al., J Clin Oncol, 26: 1657-1663, 2008.
Prior P reference Vallee MP et al., Human Mutation 37: 627-639, 2016
Missense analysis Prior P 0.02
Splicing prior P 0.64
Other Prior P 0.00
Combined prior P 0.64
Segregation LR 2.7
Pathology LR 0.72
Sum Family LR -
Co-occurrence LR 1.33E-05
case-control LR -
Product of LRs 2.59E-05
Comments -

1 entry in BRCA2

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
?/? Unknown 11 c.2803G>A 3031G>A p.D935N 0.00005 1 - Not pathogenic or of no clinical significance Spurdle AB et al., J Clin Oncol, 26: 1657-1663, 2008. Vallee MP et al., Human Mutation 37: 627-639, 2016 0.02 0.64 0.00 0.64 2.7 0.72 - 1.33E-05 - 2.59E-05 -