LOVD - Variant listings for BRCA2

Patient data (#0000364)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Andrew Paquette

Variant data
Allele Unknown
Reported pathogenicity Unknown
Concluded pathogenicity Unknown
Exon 12
DNA change c.6935A>T
BIC DNA change 7163A>T
Protein change p.D2312V
Posterior P 0.00003
IARC Class 1 - Not pathogenic or of no clinical significance
Key Observational Reference Easton DF et al., Am J Hum Genet, 81: 873-883, 2007.
Prior P reference Vallee MP et al., Human Mutation 37: 627-639, 2016
Missense analysis Prior P 0.02
Splicing prior P 0.5
Other Prior P 0.00
Combined prior P 0.50
Segregation LR 0.0123
Pathology LR -
Sum Family LR 1.15
Co-occurrence LR 1.86E-03
case-control LR -
Product of LRs 2.63E-05
Comments -

1 entry in BRCA2

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
?/? Unknown 12 c.6935A>T 7163A>T p.D2312V 0.00003 1 - Not pathogenic or of no clinical significance Easton DF et al., Am J Hum Genet, 81: 873-883, 2007. Vallee MP et al., Human Mutation 37: 627-639, 2016 0.02 0.5 0.00 0.50 0.0123 - 1.15 1.86E-03 - 2.63E-05 -