LOVD - Variant listings for BRCA2

Patient data (#0001782)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Tiana Francy

Variant data
Allele Unknown
Reported pathogenicity -
Concluded pathogenicity -
Exon 2
DNA change c.3G>A
BIC DNA change 231G>A
Protein change p.M1I
Posterior P 0.999735509
IARC Class 5 - Pathogenic
Key Observational Reference Parsons et al 2019
Prior P reference -
Missense analysis Prior P -
Splicing prior P -
Other Prior P 0.02
Combined prior P 0.96
Segregation LR 67.62110446
Pathology LR 2.172628915
Sum Family LR -
Co-occurrence LR 1.072
case-control LR -
Product of LRs 157.4934876
Comments Translation initiation methionine site

1 entry in BRCA2

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
- Unknown 2 c.3G>A 231G>A p.M1I 0.999735509 5 - Pathogenic Parsons et al 2019 - - - 0.02 0.96 67.62110446 2.172628915 - 1.072 - 157.4934876 Translation initiation methionine site