Variants - Database of BRCA1 and BRCA2 sequence variants that have been clinically reclassified using a quantitative integrated evaluation - Leiden Open Variation Database

Database of BRCA1 and BRCA2 sequence variants that have been clinically reclassified using a quantitative integrated evaluation

Breast Cancer Type 2 susceptibility protein (BRCA2)

LOVD v.2.0 Build 22 [ Current LOVD status ]
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Curators: Julie Boyle and HCI / Tavtigian Lab

Patient data (#0001874)
Disease	-
Reference	United States:Salt Lake City
Template	DNA
Technique	SEQ
Remarks	-
# Reported	1
Submitter	Tiana Francy

Variant data
Allele	Unknown
Reported pathogenicity	-
Concluded pathogenicity	Unknown
Exon	17
DNA change	c.7883T>C
BIC DNA change	8111T>C
Protein change	p.I2628T
Posterior P	0.453588343
IARC Class	3 - Uncertain
Key Observational Reference	Parsons et al 2019
Prior P reference	-
Missense analysis Prior P	0.29
Splicing prior P	-
Other Prior P	0.02
Combined prior P	0.29
Segregation LR	1.8088
Pathology LR	1.1236
Sum Family LR	-
Co-occurrence LR	-
case-control LR	-
Product of LRs	2.03236768
Comments	-

1 entry in BRCA2

Path.

Allele

Exon

DNA change

BIC DNA change

Protein change

Posterior P

IARC Class

Key Observational Reference

Prior P reference

Missense analysis Prior P

Splicing prior P

Other Prior P

Combined prior P

Segregation LR

Pathology LR

Sum Family LR

Co-occurrence LR

case-control LR

Product of LRs

Comments

-

Unknown

17

8111T>C

p.I2628T

0.453588343

3 - Uncertain

Parsons et al 2019

-

0.29

-

0.02

0.29

1.8088

1.1236

-

-

-

2.03236768

-