Variants - Database of BRCA1 and BRCA2 sequence variants that have been clinically reclassified using a quantitative integrated evaluation - Leiden Open Variation Database

Database of BRCA1 and BRCA2 sequence variants that have been clinically reclassified using a quantitative integrated evaluation

Breast Cancer Type 2 susceptibility protein (BRCA2)

LOVD v.2.0 Build 22 [ Current LOVD status ]
Register as submitter | Log in

Curators: Julie Boyle and HCI / Tavtigian Lab

Patient data (#0001895)
Disease	-
Reference	United States:Salt Lake City
Template	DNA
Technique	SEQ
Remarks	-
# Reported	1
Submitter	Tiana Francy

Variant data
Allele	Unknown
Reported pathogenicity	-
Concluded pathogenicity	Unknown
Exon	15
DNA change	c.7504C>T
BIC DNA change	7732C>T
Protein change	p.R2502C
Posterior P	0.117389523
IARC Class	3 - Uncertain
Key Observational Reference	Parsons et al 2019
Prior P reference	-
Missense analysis Prior P	0.03
Splicing prior P	-
Other Prior P	0.02
Combined prior P	0.03
Segregation LR	0.1671
Pathology LR	1.2213
Sum Family LR	6.719715937
Co-occurrence LR	3.135891423
case-control LR	-
Product of LRs	4.30041867
Comments	-

1 entry in BRCA2

Path.

Allele

Exon

DNA change

BIC DNA change

Protein change

Posterior P

IARC Class

Key Observational Reference

Prior P reference

Missense analysis Prior P

Splicing prior P

Other Prior P

Combined prior P

Segregation LR

Pathology LR

Sum Family LR

Co-occurrence LR

case-control LR

Product of LRs

Comments

-

Unknown

15

7732C>T

p.R2502C

0.117389523

3 - Uncertain

Parsons et al 2019

-

0.03

-

0.02

0.03

0.1671

1.2213

6.719715937

3.135891423

-

4.30041867

-