LOVD - Variant listings for BRCA2

Patient data (#0002021)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Tiana Francy

Variant data
Allele Unknown
Reported pathogenicity -
Concluded pathogenicity Probably no pathogenicity
Exon 25
DNA change c.9275A>G
BIC DNA change 9503A>G
Protein change p.Y3092C
Posterior P 0.031992835
IARC Class 2 - Likely not pathogenic or of little clinical significance
Key Observational Reference Parsons et al 2019
Prior P reference -
Missense analysis Prior P 0.81
Splicing prior P -
Other Prior P 0.02
Combined prior P 0.81
Segregation LR 1.160082
Pathology LR 1.1342
Sum Family LR 0.004620146
Co-occurrence LR 1.275289324
case-control LR -
Product of LRs 0.007752517
Comments -

1 entry in BRCA2

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
- Unknown 25 c.9275A>G 9503A>G p.Y3092C 0.031992835 2 - Likely not pathogenic or of little clinical significance Parsons et al 2019 - 0.81 - 0.02 0.81 1.160082 1.1342 0.004620146 1.275289324 - 0.007752517 -