LOVD - Variant listings for BRCA2

Patient data (#0002038)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Tiana Francy

Variant data
Allele Unknown
Reported pathogenicity -
Concluded pathogenicity Probably no pathogenicity
Exon 24
DNA change c.9155G>A
BIC DNA change 9383G>A
Protein change p.R3052Q
Posterior P 0.008431864
IARC Class 2 - Likely not pathogenic or of little clinical significance
Key Observational Reference Parsons et al 2019
Prior P reference -
Missense analysis Prior P 0.66
Splicing prior P -
Other Prior P 0.02
Combined prior P 0.66
Segregation LR 0.396585787
Pathology LR 5.10422528
Sum Family LR 0.058209553
Co-occurrence LR 0.048590003
case-control LR 0.765117
Product of LRs 0.004380624
Comments -

1 entry in BRCA2

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
- Unknown 24 c.9155G>A 9383G>A p.R3052Q 0.008431864 2 - Likely not pathogenic or of little clinical significance Parsons et al 2019 - 0.66 - 0.02 0.66 0.396585787 5.10422528 0.058209553 0.048590003 0.765117 0.004380624 -