LOVD - Variant listings for BRCA2

Patient data (#0002120)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Tiana Francy

Variant data
Allele Unknown
Reported pathogenicity -
Concluded pathogenicity No known pathogenicity
Exon 12
DNA change c.6935A>T
BIC DNA change 7163A>T
Protein change p.D2312V
Posterior P 2.66083E-05
IARC Class 1 - Not pathogenic or of no clinical significance
Key Observational Reference Parsons et al 2019
Prior P reference -
Missense analysis Prior P 0.02
Splicing prior P 0.5
Other Prior P 0.02
Combined prior P 0.5
Segregation LR 0.0124
Pathology LR -
Sum Family LR 1.159101664
Co-occurrence LR 0.001851336
case-control LR -
Product of LRs 0.000026609
Comments -

1 entry in BRCA2

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
- Unknown 12 c.6935A>T 7163A>T p.D2312V 2.66083E-05 1 - Not pathogenic or of no clinical significance Parsons et al 2019 - 0.02 0.5 0.02 0.5 0.0124 - 1.159101664 0.001851336 - 0.000026609 -