LOVD - Variant listings for BRCA2

Patient data (#0000343)
Disease -
Reference United States:Salt Lake City
Template DNA
Technique SEQ
Remarks -
# Reported 1
Submitter Andrew Paquette

Variant data
Allele Unknown
Reported pathogenicity Unknown
Concluded pathogenicity Unknown
Exon 3
DNA change c.316+5G>A
BIC DNA change IVS3+5G>A
Protein change -
Posterior P 0.744
IARC Class 3 - Uncertain
Key Observational Reference Thomassen M et al., Breast Cancer Res Treat. 2012 Apr, 132(3):1009-23.
Prior P reference Vallee MP et al., Human Mutation 37: 627-639, 2016
Missense analysis Prior P -
Splicing prior P 0.34
Other Prior P 0.00
Combined prior P 0.34
Segregation LR 3.16
Pathology LR -
Sum Family LR 1.51
Co-occurrence LR 1.18
case-control LR -
Product of LRs 5.64
Comments -

1 entry in BRCA2

Path. Allele
Exon Descending
Ascending
DNA change Descending
Ascending
BIC DNA change Descending
Ascending
Protein change Descending
Ascending
Posterior P Descending
Ascending
IARC Class Descending
Ascending
Key Observational Reference Descending
Ascending
Prior P reference Descending
Ascending
Missense analysis Prior P Descending
Ascending
Splicing prior P Descending
Ascending
Other Prior P Descending
Ascending
Combined prior P Descending
Ascending
Segregation LR Descending
Ascending
Pathology LR Descending
Ascending
Sum Family LR Descending
Ascending
Co-occurrence LR Descending
Ascending
case-control LR Descending
Ascending
Product of LRs Descending
Ascending
Comments Descending
Ascending
?/? Unknown 3 c.316+5G>A IVS3+5G>A - 0.744 3 - Uncertain Thomassen M et al., Breast Cancer Res Treat. 2012 Apr, 132(3):1009-23. Vallee MP et al., Human Mutation 37: 627-639, 2016 - 0.34 0.00 0.34 3.16 - 1.51 1.18 - 5.64 -